Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.35■□□□□ 0.05
CDH3P22223 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 SPDYE19P-201ENST00000338590 713 ntBASIC15.35■□□□□ 0.05
CDH3P22223 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH3P22223 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH3P22223 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 DOC2GP-202ENST00000514950 1163 ntBASIC15.35■□□□□ 0.05
CDH3P22223 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH3P22223 AC025048.3-201ENST00000590609 569 ntBASIC15.35■□□□□ 0.05
CDH3P22223 AC027307.3-201ENST00000594262 1100 ntBASIC15.35■□□□□ 0.05
CDH3P22223 AL132655.2-201ENST00000596276 594 ntBASIC15.35■□□□□ 0.05
CDH3P22223 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH3P22223 AC074044.1-201ENST00000609673 707 ntBASIC15.35■□□□□ 0.05
CDH3P22223 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.35■□□□□ 0.05
CDH3P22223 AC005702.4-201ENST00000618393 416 ntBASIC15.35■□□□□ 0.05
CDH3P22223 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CDH3P22223 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH3P22223 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH3P22223 AL596087.1-201ENST00000400979 1969 ntBASIC15.35■□□□□ 0.05
CDH3P22223 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 AC007541.1-201ENST00000570282 1469 ntBASIC15.34■□□□□ 0.05
CDH3P22223 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 AC026748.1-201ENST00000624349 3251 ntBASIC15.34■□□□□ 0.05
CDH3P22223 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH3P22223 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH3P22223 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.34■□□□□ 0.05
CDH3P22223 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH3P22223 GNAQP1-201ENST00000444815 1067 ntBASIC15.34■□□□□ 0.05
CDH3P22223 EEF1DP4-201ENST00000446006 880 ntBASIC15.34■□□□□ 0.05
CDH3P22223 CRB3P1-201ENST00000449338 276 ntBASIC15.34■□□□□ 0.05
CDH3P22223 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH3P22223 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH3P22223 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH3P22223 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH3P22223 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH3P22223 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH3P22223 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms