Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 ANKRD19P-201ENST00000338192 862 ntBASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 ACKR1-201ENST00000368121 1240 ntBASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 AC092384.3-202ENST00000564646 2873 ntBASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAB40ALP0C0E4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AC012441.1-201ENST00000446669 685 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 BCRP2-202ENST00000447763 634 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 CTBP2P5-201ENST00000454986 1264 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 BCRP6-201ENST00000510112 632 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 BCRP7-201ENST00000511549 544 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB40ALP0C0E4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 DRD5P1-201ENST00000456605 1438 ntBASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40ALP0C0E4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms