Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RETP07949 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RETP07949 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 AL591846.1-201ENST00000451736 433 ntBASIC15.7■□□□□ 0.1
RETP07949 AC091804.1-201ENST00000486888 567 ntBASIC15.7■□□□□ 0.1
RETP07949 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.7■□□□□ 0.1
RETP07949 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RETP07949 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.7■□□□□ 0.1
RETP07949 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RETP07949 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RETP07949 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RETP07949 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.7■□□□□ 0.1
RETP07949 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.7■□□□□ 0.1
RETP07949 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RETP07949 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
RETP07949 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
RETP07949 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.69■□□□□ 0.1
RETP07949 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.69■□□□□ 0.1
RETP07949 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.69■□□□□ 0.1
RETP07949 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 TOMM22P5-201ENST00000416399 439 ntBASIC15.69■□□□□ 0.1
RETP07949 HINT2P1-201ENST00000419438 481 ntBASIC15.69■□□□□ 0.1
RETP07949 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.69■□□□□ 0.1
RETP07949 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.69■□□□□ 0.1
RETP07949 AC005077.2-201ENST00000449786 690 ntBASIC15.69■□□□□ 0.1
RETP07949 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.69■□□□□ 0.1
RETP07949 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.69■□□□□ 0.1
RETP07949 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RETP07949 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.69■□□□□ 0.1
RETP07949 AC105129.2-201ENST00000559536 390 ntBASIC15.69■□□□□ 0.1
RETP07949 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.69■□□□□ 0.1
RETP07949 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
RETP07949 AC020914.3-201ENST00000594712 304 ntBASIC15.69■□□□□ 0.1
RETP07949 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RETP07949 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.69■□□□□ 0.1
RETP07949 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RETP07949 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RETP07949 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.69■□□□□ 0.1
RETP07949 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RETP07949 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RETP07949 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RETP07949 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 MSTO2P-201ENST00000314835 1709 ntBASIC15.68■□□□□ 0.1
RETP07949 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.68■□□□□ 0.1
RETP07949 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms