Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 CRYGEP-201ENST00000412192 528 ntBASIC11.76□□□□□ -0.53
LTAP01374 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 HCG4B-203ENST00000450128 991 ntBASIC11.76□□□□□ -0.53
LTAP01374 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.76□□□□□ -0.53
LTAP01374 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.76□□□□□ -0.53
LTAP01374 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.76□□□□□ -0.53
LTAP01374 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LTAP01374 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 AC092135.3-201ENST00000624151 1846 ntBASIC11.76□□□□□ -0.53
LTAP01374 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.76□□□□□ -0.53
LTAP01374 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
LTAP01374 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
LTAP01374 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LTAP01374 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LTAP01374 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.75□□□□□ -0.53
LTAP01374 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 AC136604.1-201ENST00000418535 575 ntBASIC11.75□□□□□ -0.53
LTAP01374 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.75□□□□□ -0.53
LTAP01374 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.75□□□□□ -0.53
LTAP01374 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.75□□□□□ -0.53
LTAP01374 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.75□□□□□ -0.53
LTAP01374 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.75□□□□□ -0.53
LTAP01374 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
LTAP01374 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.75□□□□□ -0.53
LTAP01374 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 AP000845.1-201ENST00000581677 2131 ntBASIC11.75□□□□□ -0.53
LTAP01374 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 FOXO1B-201ENST00000504678 1527 ntBASIC11.75□□□□□ -0.53
LTAP01374 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LTAP01374 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.75□□□□□ -0.53
LTAP01374 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.75□□□□□ -0.53
LTAP01374 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LTAP01374 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LTAP01374 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LTAP01374 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms