Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 AC009486.1-201ENST00000569860 813 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 AC233724.13-201ENST00000598383 410 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 AL512343.1-201ENST00000605837 169 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 AC011270.2-201ENST00000624293 2550 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 AC134312.5-201ENST00000568031 1313 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SMAD6O43541 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
SMAD6O43541 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 AC087481.3-201ENST00000602886 1894 ntBASIC15.65■□□□□ 0.1
SMAD6O43541 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
SMAD6O43541 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.65■□□□□ 0.1
SMAD6O43541 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SMAD6O43541 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 AC012441.1-201ENST00000446669 685 ntBASIC15.65■□□□□ 0.1
SMAD6O43541 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.65■□□□□ 0.1
SMAD6O43541 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.65■□□□□ 0.1
SMAD6O43541 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.65■□□□□ 0.1
SMAD6O43541 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.65■□□□□ 0.1
SMAD6O43541 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.65■□□□□ 0.1
SMAD6O43541 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 SSR4P1-203ENST00000599569 2260 ntBASIC15.65■□□□□ 0.1
SMAD6O43541 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMAD6O43541 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.65■□□□□ 0.1
SMAD6O43541 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
SMAD6O43541 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SMAD6O43541 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 ACKR1-201ENST00000368121 1240 ntBASIC15.64■□□□□ 0.09
SMAD6O43541 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMAD6O43541 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.64■□□□□ 0.09
SMAD6O43541 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.64■□□□□ 0.09
SMAD6O43541 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.64■□□□□ 0.09
SMAD6O43541 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.64■□□□□ 0.09
SMAD6O43541 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.64■□□□□ 0.09
SMAD6O43541 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.64■□□□□ 0.09
SMAD6O43541 AC106760.1-201ENST00000508690 800 ntBASIC15.64■□□□□ 0.09
SMAD6O43541 IGHV3-71-201ENST00000523324 359 ntBASIC15.64■□□□□ 0.09
SMAD6O43541 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.64■□□□□ 0.09
SMAD6O43541 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.64■□□□□ 0.09
SMAD6O43541 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.64■□□□□ 0.09
SMAD6O43541 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.64■□□□□ 0.09
SMAD6O43541 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SMAD6O43541 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SMAD6O43541 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms