Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXN1O15353 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 AC006001.1-201ENST00000325130 474 ntBASIC18.54■□□□□ 0.56
FOXN1O15353 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 HIST3H2BA-201ENST00000436555 524 ntBASIC18.54■□□□□ 0.56
FOXN1O15353 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.54■□□□□ 0.56
FOXN1O15353 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
FOXN1O15353 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN1O15353 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN1O15353 AC015818.8-201ENST00000587907 1519 ntBASIC18.54■□□□□ 0.56
FOXN1O15353 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
FOXN1O15353 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FOXN1O15353 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FOXN1O15353 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXN1O15353 AL139010.1-201ENST00000454878 894 ntBASIC18.53■□□□□ 0.56
FOXN1O15353 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 AP001063.1-201ENST00000568332 529 ntBASIC18.53■□□□□ 0.56
FOXN1O15353 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 AL136301.1-201ENST00000615830 422 ntBASIC18.53■□□□□ 0.56
FOXN1O15353 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXN1O15353 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
FOXN1O15353 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN1O15353 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXN1O15353 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN1O15353 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 OR6D1P-203ENST00000641209 4860 ntBASIC18.52■□□□□ 0.56
FOXN1O15353 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.52■□□□□ 0.56
FOXN1O15353 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
FOXN1O15353 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXN1O15353 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 POU5F1P6-201ENST00000466990 990 ntBASIC18.52■□□□□ 0.56
FOXN1O15353 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.52■□□□□ 0.56
FOXN1O15353 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 AC005252.2-201ENST00000624630 1141 ntBASIC18.52■□□□□ 0.56
FOXN1O15353 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXN1O15353 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXN1O15353 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXN1O15353 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.52■□□□□ 0.55
FOXN1O15353 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXN1O15353 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms