Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
NDUFA1O15239 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.72□□□□□ -0.69
NDUFA1O15239 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NDUFA1O15239 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NDUFA1O15239 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.71□□□□□ -0.69
NDUFA1O15239 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.71□□□□□ -0.69
NDUFA1O15239 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.71□□□□□ -0.69
NDUFA1O15239 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.71□□□□□ -0.69
NDUFA1O15239 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NDUFA1O15239 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.71□□□□□ -0.69
NDUFA1O15239 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.71□□□□□ -0.69
NDUFA1O15239 AC148477.8-201ENST00000624298 468 ntBASIC10.71□□□□□ -0.69
NDUFA1O15239 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
NDUFA1O15239 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.71□□□□□ -0.69
NDUFA1O15239 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NDUFA1O15239 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.71□□□□□ -0.7
NDUFA1O15239 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.7
NDUFA1O15239 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
NDUFA1O15239 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.7
NDUFA1O15239 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.71□□□□□ -0.7
NDUFA1O15239 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
NDUFA1O15239 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
NDUFA1O15239 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
NDUFA1O15239 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.7□□□□□ -0.7
NDUFA1O15239 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.7□□□□□ -0.7
NDUFA1O15239 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
NDUFA1O15239 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
NDUFA1O15239 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms