Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 STX7-201ENST00000367937 1090 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TMED1-207ENST00000591695 809 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 TKT-202ENST00000423516 2075 ntTSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 AC099521.2-201ENST00000619354 2036 ntBASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC8.61□□□□□ -1.03
CHKB-CPT1BH3BT56 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 OTOF-205ENST00000403946 6937 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC007614.4-201ENST00000564048 1827 ntBASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC092135.3-201ENST00000624151 1846 ntBASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC004980.1-204ENST00000429707 299 ntBASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 WWOX-218ENST00000627394 894 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 AC022400.8-201ENST00000623453 3599 ntBASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 TKT-201ENST00000296289 1931 ntTSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 MST1P2-201ENST00000457982 2291 ntBASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CHKB-CPT1BH3BT56 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms