Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SHISA3A0PJX4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SHISA3A0PJX4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHISA3A0PJX4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHISA3A0PJX4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SHISA3A0PJX4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AC025580.3-201ENST00000617932 1424 ntBASIC13.58□□□□□ -0.24
SHISA3A0PJX4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AZGP1P1-201ENST00000411909 902 ntBASIC13.58□□□□□ -0.24
SHISA3A0PJX4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 TPM4P1-201ENST00000436100 807 ntBASIC13.58□□□□□ -0.24
SHISA3A0PJX4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 UNC93B6-202ENST00000528242 690 ntBASIC13.58□□□□□ -0.24
SHISA3A0PJX4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AL049840.3-201ENST00000602669 611 ntBASIC13.58□□□□□ -0.24
SHISA3A0PJX4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SHISA3A0PJX4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.57□□□□□ -0.24
SHISA3A0PJX4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 KRT18P67-201ENST00000432816 1264 ntBASIC13.57□□□□□ -0.24
SHISA3A0PJX4 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 AC105233.2-201ENST00000523697 349 ntBASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 AF228730.5-201ENST00000530288 346 ntBASIC13.57□□□□□ -0.24
SHISA3A0PJX4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SHISA3A0PJX4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms