Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 RBPMS2P1-201ENST00000437762 623 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 CYMP-203ENST00000474680 1263 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AL512356.2-201ENST00000546955 174 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AC073389.1-201ENST00000595595 795 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AP001059.3-201ENST00000619053 235 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 AL691432.1-201ENST00000596308 1422 ntBASIC14.14□□□□□ -0.15
TMEM129A0AVI4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM129A0AVI4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 BNIP3P1-202ENST00000550043 1585 ntBASIC14.13□□□□□ -0.15
TMEM129A0AVI4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC140479.7-201ENST00000636301 2332 ntBASIC14.13□□□□□ -0.15
TMEM129A0AVI4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 AC139749.1-202ENST00000617529 3139 ntBASIC14.13□□□□□ -0.15
TMEM129A0AVI4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM129A0AVI4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM129A0AVI4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms