Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 AC105250.1-201ENST00000509378 2057 ntBASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV1A0A0A0MS02 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC126177.1-201ENST00000547829 2218 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC022532.1-201ENST00000624563 1728 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC069262.1-201ENST00000539058 672 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC025678.2-201ENST00000562061 970 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC127383.1-201ENST00000444697 1800 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC090616.6-203ENST00000579186 1945 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 AC104640.1-201ENST00000562617 2109 ntBASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV1A0A0A0MS02 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV1A0A0A0MS02 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms