Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AL691403.2-201ENST00000618460 490 ntBASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 AC026748.1-201ENST00000624349 3251 ntBASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA11Q9Y5H2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 HLA-V-204ENST00000476601 1289 ntBASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AC004449.1-201ENST00000564240 433 ntBASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 AC023511.2-201ENST00000618803 211 ntBASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA11Q9Y5H2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms