Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 UGT1A2P-201ENST00000454886 866 ntBASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC135586.1-201ENST00000539323 574 ntBASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC004461.2-201ENST00000629517 803 ntBASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AC006058.4-201ENST00000624016 1670 ntBASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 PPT1-215ENST00000641471 2368 ntBASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 FAM207CP-201ENST00000443486 507 ntBASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPARGC1AQ9UBK2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 FAM8A3P-201ENST00000427218 844 ntBASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 TSPY16P-201ENST00000449843 468 ntBASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SLED1-202ENST00000512051 380 ntBASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 AC009118.2-201ENST00000613275 655 ntBASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
PPARGC1AQ9UBK2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms