Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC067930.6-201ENST00000623257 4947 ntBASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 RPL5P21-201ENST00000404620 815 ntBASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC107890.1-201ENST00000422478 521 ntBASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 RPL13P2-201ENST00000440687 659 ntBASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC140878.1-201ENST00000565277 250 ntBASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHRAC1Q9NRG0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRAC1Q9NRG0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AC092580.3-201ENST00000430932 139 ntBASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 RN7SL618P-201ENST00000477850 296 ntBASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 AL109936.8-201ENST00000641772 604 ntBASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRAC1Q9NRG0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRAC1Q9NRG0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms