Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 MIR661-201ENST00000384842 89 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC236430.1-201ENST00000402231 743 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC074338.1-201ENST00000416825 156 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC002472.2-201ENST00000442739 958 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 SERBP1P5-201ENST00000510079 1181 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 TIMM17BP1-201ENST00000545713 516 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC104794.3-201ENST00000566840 1248 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 LINC02560-201ENST00000596379 459 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC008761.3-201ENST00000624803 892 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC079416.2-201ENST00000625035 1193 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 AP005117.1-202ENST00000581724 1908 ntBASIC13.37□□□□□ -0.27
GCM1Q9NP62 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
GCM1Q9NP62 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GCM1Q9NP62 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms