Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
THUMPD3Q9BV44 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.99□□□□□ -0.01
THUMPD3Q9BV44 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.99□□□□□ -0.01
THUMPD3Q9BV44 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
THUMPD3Q9BV44 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 C20orf181-201ENST00000623918 480 ntBASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 AC026748.1-201ENST00000624349 3251 ntBASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
THUMPD3Q9BV44 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 LINC00528-201ENST00000600723 2160 ntBASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 YBX2P1-201ENST00000394192 760 ntBASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 TFAMP1-201ENST00000412727 736 ntBASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 RNA5SP410-201ENST00000516285 106 ntBASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD3Q9BV44 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms