Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 AL603832.2-201ENST00000566195 2125 ntBASIC18.1■□□□□ 0.49
SLF1Q9BQI6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 DRD5P1-201ENST00000456605 1438 ntBASIC18.1■□□□□ 0.49
SLF1Q9BQI6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 CTBP2P5-201ENST00000454986 1264 ntBASIC18.1■□□□□ 0.49
SLF1Q9BQI6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.1■□□□□ 0.49
SLF1Q9BQI6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 BAATP1-201ENST00000412284 1225 ntBASIC18.09■□□□□ 0.49
SLF1Q9BQI6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 AL355864.2-201ENST00000447420 863 ntBASIC18.09■□□□□ 0.49
SLF1Q9BQI6 KLF2P4-201ENST00000451959 1225 ntBASIC18.09■□□□□ 0.49
SLF1Q9BQI6 AC093433.1-201ENST00000458048 571 ntBASIC18.09■□□□□ 0.49
SLF1Q9BQI6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 AC015910.1-201ENST00000579400 975 ntBASIC18.09■□□□□ 0.49
SLF1Q9BQI6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLF1Q9BQI6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLF1Q9BQI6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLF1Q9BQI6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.08■□□□□ 0.49
SLF1Q9BQI6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLF1Q9BQI6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLF1Q9BQI6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 DBET-201ENST00000630918 3363 ntBASIC18.08■□□□□ 0.48
SLF1Q9BQI6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 AC012441.1-201ENST00000446669 685 ntBASIC18.08■□□□□ 0.48
SLF1Q9BQI6 BNIP3P42-201ENST00000454982 569 ntBASIC18.08■□□□□ 0.48
SLF1Q9BQI6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLF1Q9BQI6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms