Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ABCA3Q99758 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.08■□□□□ 0.81
ABCA3Q99758 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 AL157792.1-201ENST00000488281 530 ntBASIC20.08■□□□□ 0.81
ABCA3Q99758 POU5F1P2-201ENST00000521750 823 ntBASIC20.08■□□□□ 0.81
ABCA3Q99758 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ABCA3Q99758 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ABCA3Q99758 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ABCA3Q99758 IL9RP3-201ENST00000442856 1674 ntBASIC20.08■□□□□ 0.81
ABCA3Q99758 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.08■□□□□ 0.8
ABCA3Q99758 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
ABCA3Q99758 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ABCA3Q99758 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ABCA3Q99758 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.08■□□□□ 0.8
ABCA3Q99758 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ABCA3Q99758 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ABCA3Q99758 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ABCA3Q99758 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ABCA3Q99758 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
ABCA3Q99758 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.07■□□□□ 0.8
ABCA3Q99758 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ABCA3Q99758 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.07■□□□□ 0.8
ABCA3Q99758 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.07■□□□□ 0.8
ABCA3Q99758 AC008723.1-201ENST00000506922 207 ntBASIC20.07■□□□□ 0.8
ABCA3Q99758 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.07■□□□□ 0.8
ABCA3Q99758 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.07■□□□□ 0.8
ABCA3Q99758 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.07■□□□□ 0.8
ABCA3Q99758 AC133540.1-201ENST00000620845 1019 ntBASIC20.07■□□□□ 0.8
ABCA3Q99758 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.07■□□□□ 0.8
ABCA3Q99758 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA3Q99758 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.06■□□□□ 0.8
ABCA3Q99758 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 AC003102.2-201ENST00000589195 1469 ntBASIC20.06■□□□□ 0.8
ABCA3Q99758 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ABCA3Q99758 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ABCA3Q99758 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ABCA3Q99758 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.06■□□□□ 0.8
ABCA3Q99758 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.06■□□□□ 0.8
ABCA3Q99758 AL022334.2-201ENST00000610000 484 ntBASIC20.06■□□□□ 0.8
ABCA3Q99758 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ABCA3Q99758 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ABCA3Q99758 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.06■□□□□ 0.8
ABCA3Q99758 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCA3Q99758 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.05■□□□□ 0.8
ABCA3Q99758 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.05■□□□□ 0.8
ABCA3Q99758 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ABCA3Q99758 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.05■□□□□ 0.8
ABCA3Q99758 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
ABCA3Q99758 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ABCA3Q99758 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.05■□□□□ 0.8
ABCA3Q99758 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ABCA3Q99758 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms