Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB3IPQ96QF0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AL049597.2-201ENST00000565575 961 ntBASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AL139424.1-201ENST00000607572 797 ntBASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 HYMAI.1-201ENST00000620949 238 ntBASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 AL031595.1-201ENST00000623969 4709 ntBASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3IPQ96QF0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 PPT1-213ENST00000641319 2388 ntBASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 SLC25A6P2-201ENST00000497974 877 ntBASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 MIR4313-201ENST00000580760 101 ntBASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3IPQ96QF0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
RAB3IPQ96QF0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms