Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 AC018665.1-201ENST00000622927 1362 ntBASIC16.36■□□□□ 0.21
USP13Q92995 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 AC018892.3-201ENST00000623986 2499 ntBASIC16.36■□□□□ 0.21
USP13Q92995 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.36■□□□□ 0.21
USP13Q92995 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP13Q92995 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 ANKRD19P-201ENST00000338192 862 ntBASIC16.35■□□□□ 0.21
USP13Q92995 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 AC134915.1-201ENST00000426461 574 ntBASIC16.35■□□□□ 0.21
USP13Q92995 ACTG1P3-201ENST00000431775 1114 ntBASIC16.35■□□□□ 0.21
USP13Q92995 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.35■□□□□ 0.21
USP13Q92995 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.35■□□□□ 0.21
USP13Q92995 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.35■□□□□ 0.21
USP13Q92995 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.35■□□□□ 0.21
USP13Q92995 AP005482.1-201ENST00000563722 1273 ntBASIC16.35■□□□□ 0.21
USP13Q92995 AC124283.3-201ENST00000570869 594 ntBASIC16.35■□□□□ 0.21
USP13Q92995 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.35■□□□□ 0.21
USP13Q92995 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
USP13Q92995 COX11-210ENST00000639671 696 ntBASIC16.35■□□□□ 0.21
USP13Q92995 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.35■□□□□ 0.21
USP13Q92995 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.35■□□□□ 0.21
USP13Q92995 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP13Q92995 INTS4P2-202ENST00000614726 2019 ntBASIC16.35■□□□□ 0.21
USP13Q92995 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 KRT223P-202ENST00000449164 1292 ntBASIC16.34■□□□□ 0.21
USP13Q92995 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.34■□□□□ 0.21
USP13Q92995 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.34■□□□□ 0.21
USP13Q92995 TDH-203ENST00000531764 1110 ntBASIC16.34■□□□□ 0.21
USP13Q92995 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.34■□□□□ 0.21
USP13Q92995 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.34■□□□□ 0.21
USP13Q92995 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.34■□□□□ 0.21
USP13Q92995 AL049840.4-201ENST00000602422 811 ntBASIC16.34■□□□□ 0.21
USP13Q92995 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
USP13Q92995 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms