Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AC008761.3-201ENST00000624803 892 ntBASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AL031430.1-201ENST00000642067 1039 ntBASIC15.89■□□□□ 0.13
PTCD2Q8WV60 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AC126365.1-201ENST00000578585 1514 ntBASIC15.89■□□□□ 0.13
PTCD2Q8WV60 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 SPDYE18-201ENST00000510091 1050 ntBASIC15.88■□□□□ 0.13
PTCD2Q8WV60 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 AC004908.3-201ENST00000610248 625 ntBASIC15.88■□□□□ 0.13
PTCD2Q8WV60 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 AC009090.5-201ENST00000624886 2285 ntBASIC15.88■□□□□ 0.13
PTCD2Q8WV60 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCD2Q8WV60 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 AC138035.3-201ENST00000622706 2791 ntBASIC15.87■□□□□ 0.13
PTCD2Q8WV60 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 C18orf15-201ENST00000623680 2534 ntBASIC15.87■□□□□ 0.13
PTCD2Q8WV60 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 RPL5P21-201ENST00000404620 815 ntBASIC15.87■□□□□ 0.13
PTCD2Q8WV60 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCD2Q8WV60 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms