Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AL591684.3-201ENST00000605187 298 ntBASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NUP35Q8NFH5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 AC011474.4-201ENST00000623523 2076 ntBASIC11.71□□□□□ -0.54
NUP35Q8NFH5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
NUP35Q8NFH5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 ELK2BP-201ENST00000415014 1224 ntBASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 AC106795.1-205ENST00000512851 1056 ntBASIC11.7□□□□□ -0.54
NUP35Q8NFH5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MIR4515-201ENST00000584082 81 ntBASIC11.7□□□□□ -0.54
NUP35Q8NFH5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.7□□□□□ -0.54
NUP35Q8NFH5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.7□□□□□ -0.54
NUP35Q8NFH5 DGCR9-201ENST00000609630 2415 ntBASIC11.7□□□□□ -0.54
NUP35Q8NFH5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms