Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDRT4Q8N9R6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 LINC00554-201ENST00000564841 3011 ntBASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AC004890.2-204ENST00000481968 304 ntBASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 RFPL4AP1-201ENST00000530883 850 ntBASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AC009407.1-201ENST00000568958 598 ntBASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 AC023024.2-201ENST00000623561 1993 ntBASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.49□□□□□ -0.09
CDRT4Q8N9R6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDRT4Q8N9R6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms