Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 AC063926.3-201ENST00000624734 5658 ntBASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LSMEM1Q8N8F7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 HLA-V-204ENST00000476601 1289 ntBASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AL033527.5-202ENST00000641632 1098 ntBASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LSMEM1Q8N8F7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 KRT18P13-201ENST00000400056 1290 ntBASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 RPL37AP1-201ENST00000412502 279 ntBASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 DNAJB3-202ENST00000449667 1266 ntBASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.32□□□□□ -0.12
LSMEM1Q8N8F7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms