Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD2Q8IV50 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AP001282.1-201ENST00000531301 1499 ntBASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC104819.1-201ENST00000504587 486 ntBASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AC134407.2-201ENST00000625089 1978 ntBASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LYSMD2Q8IV50 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AL023775.1-201ENST00000454907 1746 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC018529.2-202ENST00000611482 3087 ntBASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD2Q8IV50 AC211429.1-201ENST00000415277 523 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms