Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF130Q86XS8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF130Q86XS8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF130Q86XS8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF130Q86XS8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 LINC00528-201ENST00000600723 2160 ntBASIC14.71□□□□□ -0.05
RNF130Q86XS8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 AC007292.2-201ENST00000593524 1812 ntBASIC14.71□□□□□ -0.05
RNF130Q86XS8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF130Q86XS8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF130Q86XS8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RNF130Q86XS8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF130Q86XS8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RNF130Q86XS8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF130Q86XS8 AC023908.3-201ENST00000564211 3047 ntBASIC14.71□□□□□ -0.06
RNF130Q86XS8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF130Q86XS8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
RNF130Q86XS8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 SNX18-202ENST00000343017 3140 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 AC112482.1-201ENST00000492080 688 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 MIR4453-201ENST00000584019 89 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 MIR6080-201ENST00000617359 66 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 AC009093.7-201ENST00000623853 1223 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 MYO15B-237ENST00000642007 4893 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 KRT8P12-202ENST00000472924 1397 ntBASIC14.7□□□□□ -0.06
RNF130Q86XS8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RNF130Q86XS8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF130Q86XS8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms