Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AC004987.2-201ENST00000395959 1148 ntBASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AL450472.2-201ENST00000603663 1156 ntBASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AL031008.1-201ENST00000619963 541 ntBASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AL136982.4-201ENST00000437689 1740 ntBASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC25Q86WR0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 AC005912.2-201ENST00000619492 2400 ntBASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 RNA5SP410-201ENST00000516285 106 ntBASIC16.17■□□□□ 0.18
CCDC25Q86WR0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 AC068137.2-201ENST00000605408 478 ntBASIC16.17■□□□□ 0.18
CCDC25Q86WR0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC25Q86WR0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms