Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 AC087499.6-201ENST00000411576 835 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 DFFBP1-201ENST00000433250 979 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 KRT17P8-201ENST00000540749 863 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 AC132938.2-201ENST00000579188 680 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 AL391069.4-201ENST00000609583 481 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 AL591163.1-201ENST00000641757 987 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 TMBIM7P-203ENST00000641617 1718 ntBASIC16.39■□□□□ 0.21
RNF43Q68DV7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AP002414.2-201ENST00000591780 3365 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC020658.6-201ENST00000623564 1870 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC136621.1-201ENST00000624017 2304 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC074338.1-201ENST00000416825 156 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC112492.5-201ENST00000421897 457 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 RPL13P2-201ENST00000440687 659 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC092658.1-201ENST00000505836 891 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.38■□□□□ 0.21
RNF43Q68DV7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RNF43Q68DV7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF43Q68DV7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CICP24-201ENST00000605464 2705 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CICP13-201ENST00000422015 2789 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 AC079776.1-201ENST00000401540 1152 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 AC136604.1-201ENST00000418535 575 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 AC093004.1-201ENST00000508850 424 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 DOC2GP-202ENST00000514950 1163 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms