Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FAM27BQ5VT28 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 MROH4P-201ENST00000431302 1578 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LINC00554-201ENST00000564841 3011 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 GHSR-202ENST00000427970 912 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 INGX-202ENST00000489074 768 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 RARRES2P5-201ENST00000564013 466 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 AC027796.2-201ENST00000575326 344 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 AL158212.4-201ENST00000624062 1286 ntBASIC13.63□□□□□ -0.23
FAM27BQ5VT28 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.63□□□□□ -0.23
FAM27BQ5VT28 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 CICP11-201ENST00000434745 2827 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 MEP1AP4-201ENST00000423244 1087 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 AL589987.1-201ENST00000453380 819 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 SPDYE18-201ENST00000510091 1050 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.62□□□□□ -0.23
FAM27BQ5VT28 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FAM27BQ5VT28 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms