Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LBH-202ENST00000401506 485 ntTSL 3 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 CMC1-204ENST00000423894 549 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 STUB1-204ENST00000564370 875 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 SNORD3B-2-202ENST00000571722 791 ntBASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 AL157791.1-201ENST00000553667 1699 ntBASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC22.95■■□□□ 1.26
CDC42BPAQ5VT25 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AL360270.3-201ENST00000609118 1348 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AC006480.2-201ENST00000609770 1337 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 RPL18P13-201ENST00000478088 569 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AC242376.1-201ENST00000559033 726 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AL137783.1-201ENST00000623494 1896 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AC003102.2-201ENST00000589195 1469 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 Z97180.1-201ENST00000445173 988 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 DUX4L46-201ENST00000566845 751 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 CENPX-208ENST00000584347 799 ntTSL 2 BASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 AL353770.1-201ENST00000614915 403 ntBASIC22.94■■□□□ 1.26
CDC42BPAQ5VT25 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 MVK-214ENST00000629016 1591 ntTSL 5 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 NME2-201ENST00000393183 568 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 FGFR3P1-201ENST00000449999 601 ntBASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 MDH2-205ENST00000461263 648 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 CICP11-201ENST00000434745 2827 ntBASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC22.93■■□□□ 1.26
CDC42BPAQ5VT25 KRT8P21-201ENST00000430398 1491 ntBASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 AC104073.2-201ENST00000453737 312 ntBASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 CICP13-201ENST00000422015 2789 ntBASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
CDC42BPAQ5VT25 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDC42BPAQ5VT25 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDC42BPAQ5VT25 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDC42BPAQ5VT25 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDC42BPAQ5VT25 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms