Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 ACTG1P17-201ENST00000558391 1119 ntBASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AC243562.2-201ENST00000561247 970 ntBASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 AC138028.6-201ENST00000616106 1482 ntBASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTC1Q2NKJ3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 PKD1P1-201ENST00000458669 6805 ntBASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 AC007969.1-201ENST00000433675 447 ntBASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 AC004898.1-201ENST00000451057 766 ntBASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 AC025279.2-201ENST00000569730 653 ntBASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTC1Q2NKJ3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms