Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
VBP1P61758 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 AC012569.1-201ENST00000591191 1524 ntBASIC14.05□□□□□ -0.16
VBP1P61758 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VBP1P61758 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VBP1P61758 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.04□□□□□ -0.16
VBP1P61758 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.04□□□□□ -0.16
VBP1P61758 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VBP1P61758 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.04□□□□□ -0.16
VBP1P61758 MIR4321-201ENST00000592276 80 ntBASIC14.04□□□□□ -0.16
VBP1P61758 AC021097.1-201ENST00000607902 574 ntBASIC14.04□□□□□ -0.16
VBP1P61758 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.04□□□□□ -0.16
VBP1P61758 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 Z82170.1-201ENST00000625081 3192 ntBASIC14.04□□□□□ -0.16
VBP1P61758 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 AC105206.1-202ENST00000314927 2368 ntBASIC14.04□□□□□ -0.16
VBP1P61758 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VBP1P61758 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VBP1P61758 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
VBP1P61758 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
VBP1P61758 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VBP1P61758 CHCHD2P8-201ENST00000429873 447 ntBASIC14.03□□□□□ -0.16
VBP1P61758 KRT17P6-201ENST00000453795 1220 ntBASIC14.03□□□□□ -0.16
VBP1P61758 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 AC091076.1-201ENST00000610741 619 ntBASIC14.03□□□□□ -0.16
VBP1P61758 GGTLC5P-201ENST00000617623 998 ntBASIC14.03□□□□□ -0.16
VBP1P61758 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 AC129492.6-201ENST00000611383 1305 ntBASIC14.03□□□□□ -0.16
VBP1P61758 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms