Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 AP001282.1-201ENST00000531301 1499 ntBASIC14.93□□□□□ -0.02
CLDN6P56747 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.93□□□□□ -0.02
CLDN6P56747 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN6P56747 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN6P56747 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 SCARNA20.5-201ENST00000516991 142 ntBASIC14.92□□□□□ -0.02
CLDN6P56747 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN6P56747 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDN6P56747 AC093813.1-201ENST00000605066 256 ntBASIC14.92□□□□□ -0.02
CLDN6P56747 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CLDN6P56747 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.92□□□□□ -0.02
CLDN6P56747 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CLDN6P56747 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
CLDN6P56747 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN6P56747 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN6P56747 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDN6P56747 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDN6P56747 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDN6P56747 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN6P56747 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CLDN6P56747 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN6P56747 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CLDN6P56747 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN6P56747 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 AC020914.3-201ENST00000594712 304 ntBASIC14.91□□□□□ -0.02
CLDN6P56747 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.91□□□□□ -0.02
CLDN6P56747 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN6P56747 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN6P56747 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN6P56747 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms