Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.63□□□□□ -0.23
FOXG1P55316 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.63□□□□□ -0.23
FOXG1P55316 AC133539.2-201ENST00000604757 467 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 AL358472.5-202ENST00000641448 1267 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
FOXG1P55316 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
FOXG1P55316 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
FOXG1P55316 CU639417.3-201ENST00000624240 1404 ntBASIC13.63□□□□□ -0.23
FOXG1P55316 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXG1P55316 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
FOXG1P55316 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 LINC00554-201ENST00000564841 3011 ntBASIC13.62□□□□□ -0.23
FOXG1P55316 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.62□□□□□ -0.23
FOXG1P55316 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 AC112693.3-201ENST00000624819 1983 ntBASIC13.62□□□□□ -0.23
FOXG1P55316 AC011270.2-201ENST00000624293 2550 ntBASIC13.62□□□□□ -0.23
FOXG1P55316 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
FOXG1P55316 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 C1QBPP1-201ENST00000400117 770 ntBASIC13.62□□□□□ -0.23
FOXG1P55316 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.62□□□□□ -0.23
FOXG1P55316 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
FOXG1P55316 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
FOXG1P55316 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXG1P55316 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXG1P55316 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXG1P55316 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 C18orf15-201ENST00000623680 2534 ntBASIC13.61□□□□□ -0.23
FOXG1P55316 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.61□□□□□ -0.23
FOXG1P55316 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.61□□□□□ -0.23
FOXG1P55316 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FOXG1P55316 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXG1P55316 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms