Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH13P55290 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH13P55290 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH13P55290 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDH13P55290 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH13P55290 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.29■□□□□ 0.04
CDH13P55290 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CDH13P55290 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 MTND6P24-201ENST00000440466 518 ntBASIC15.29■□□□□ 0.04
CDH13P55290 SPDYE14P-201ENST00000442619 822 ntBASIC15.29■□□□□ 0.04
CDH13P55290 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 DNAJB3-201ENST00000446806 729 ntBASIC15.29■□□□□ 0.04
CDH13P55290 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 YBX1P5-201ENST00000509441 847 ntBASIC15.29■□□□□ 0.04
CDH13P55290 AC026150.2-201ENST00000564693 1156 ntBASIC15.29■□□□□ 0.04
CDH13P55290 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH13P55290 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
CDH13P55290 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CDH13P55290 RN7SL828P-201ENST00000607615 303 ntBASIC15.29■□□□□ 0.04
CDH13P55290 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 SNX18-202ENST00000343017 3140 ntBASIC15.29■□□□□ 0.04
CDH13P55290 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH13P55290 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH13P55290 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH13P55290 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CDH13P55290 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH13P55290 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH13P55290 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH13P55290 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms