Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 AL133267.1-201ENST00000398220 340 ntBASIC13.87□□□□□ -0.19
SLC25A1P53007 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLC25A1P53007 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SLC25A1P53007 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
SLC25A1P53007 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC25A1P53007 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC25A1P53007 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC25A1P53007 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 AL645728.2-202ENST00000641679 227 ntBASIC13.87□□□□□ -0.19
SLC25A1P53007 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SLC25A1P53007 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 REXO1L2P-201ENST00000425429 2069 ntBASIC13.87□□□□□ -0.19
SLC25A1P53007 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC25A1P53007 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC25A1P53007 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC25A1P53007 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC25A1P53007 SPDYE7P-202ENST00000420373 878 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC25A1P53007 SERBP1P3-201ENST00000459980 809 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 MIR4453-201ENST00000584019 89 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 AL671883.3-201ENST00000603274 991 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 AP001059.3-201ENST00000619053 235 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 AL009178.2-201ENST00000597278 2719 ntBASIC13.86□□□□□ -0.19
SLC25A1P53007 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC25A1P53007 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC25A1P53007 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC25A1P53007 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SLC25A1P53007 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms