Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
LBX1P52954 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
LBX1P52954 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.15■□□□□ 0.34
LBX1P52954 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.15■□□□□ 0.34
LBX1P52954 ACTG1P19-201ENST00000418987 1116 ntBASIC17.15■□□□□ 0.34
LBX1P52954 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 RPL35P9-201ENST00000446059 350 ntBASIC17.15■□□□□ 0.34
LBX1P52954 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.15■□□□□ 0.34
LBX1P52954 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.15■□□□□ 0.34
LBX1P52954 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.15■□□□□ 0.34
LBX1P52954 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.15■□□□□ 0.34
LBX1P52954 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LBX1P52954 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.15■□□□□ 0.34
LBX1P52954 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.15■□□□□ 0.34
LBX1P52954 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LBX1P52954 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 AC009093.2-202ENST00000620513 2079 ntBASIC17.14■□□□□ 0.33
LBX1P52954 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.14■□□□□ 0.33
LBX1P52954 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LBX1P52954 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LBX1P52954 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.14■□□□□ 0.33
LBX1P52954 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.14■□□□□ 0.33
LBX1P52954 AC092580.1-201ENST00000433998 658 ntBASIC17.14■□□□□ 0.33
LBX1P52954 AC053503.3-201ENST00000448375 114 ntBASIC17.14■□□□□ 0.33
LBX1P52954 AC010900.1-201ENST00000449849 1296 ntBASIC17.14■□□□□ 0.33
LBX1P52954 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LBX1P52954 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.14■□□□□ 0.33
LBX1P52954 TREHP1-201ENST00000531328 465 ntBASIC17.14■□□□□ 0.33
LBX1P52954 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.14■□□□□ 0.33
LBX1P52954 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.14■□□□□ 0.33
LBX1P52954 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.14■□□□□ 0.33
LBX1P52954 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.14■□□□□ 0.33
LBX1P52954 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.14■□□□□ 0.33
LBX1P52954 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.14■□□□□ 0.33
LBX1P52954 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.14■□□□□ 0.33
LBX1P52954 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.14■□□□□ 0.33
LBX1P52954 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LBX1P52954 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 KRT8P31-201ENST00000504812 1408 ntBASIC17.13■□□□□ 0.33
LBX1P52954 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LBX1P52954 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.13■□□□□ 0.33
LBX1P52954 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LBX1P52954 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC17.13■□□□□ 0.33
LBX1P52954 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 AF274858.1-201ENST00000406288 372 ntBASIC17.13■□□□□ 0.33
LBX1P52954 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.13■□□□□ 0.33
LBX1P52954 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.13■□□□□ 0.33
LBX1P52954 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.13■□□□□ 0.33
LBX1P52954 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.13■□□□□ 0.33
LBX1P52954 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms