Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PCP4P48539 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC10.34□□□□□ -0.75
PCP4P48539 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
PCP4P48539 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.75
PCP4P48539 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 PRMT2-205ENST00000397637 2880 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 AC073065.1-201ENST00000411678 2866 ntBASIC10.33□□□□□ -0.76
PCP4P48539 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 AC009159.4-201ENST00000624606 2031 ntBASIC10.33□□□□□ -0.76
PCP4P48539 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 EHF-202ENST00000450654 2519 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 SIDT2-220ENST00000628876 2609 ntTSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 PES1-205ENST00000405677 2708 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 AL031731.1-201ENST00000642131 2094 ntBASIC10.33□□□□□ -0.76
PCP4P48539 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PCP4P48539 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 TCTE1-202ENST00000371505 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 SVEP1-201ENST00000374461 3257 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PCP4P48539 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PCP4P48539 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 AL157996.1-201ENST00000624684 2299 ntBASIC10.32□□□□□ -0.76
PCP4P48539 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.32□□□□□ -0.76
PCP4P48539 CALM3-209ENST00000597743 577 ntTSL 4 BASIC10.32□□□□□ -0.76
PCP4P48539 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC10.32□□□□□ -0.76
PCP4P48539 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 AC090616.6-203ENST00000579186 1945 ntBASIC10.32□□□□□ -0.76
PCP4P48539 PRKAG2-201ENST00000287878 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC10.32□□□□□ -0.76
PCP4P48539 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PCP4P48539 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms