RNA–Protein interactions for RNA: ENST00000558259.5

APBA2-204, Transcript of amyloid beta precursor protein binding family A member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA2, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA2-204ENST00000558259 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
APBA2-204ENST00000558259 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
APBA2-204ENST00000558259 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
APBA2-204ENST00000558259 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.8
APBA2-204ENST00000558259 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.77
APBA2-204ENST00000558259 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
APBA2-204ENST00000558259 HRCP23327 699 aa19.11■□□□□ 0.65
APBA2-204ENST00000558259 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
APBA2-204ENST00000558259 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
APBA2-204ENST00000558259 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
APBA2-204ENST00000558259 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
APBA2-204ENST00000558259 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
APBA2-204ENST00000558259 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
APBA2-204ENST00000558259 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
APBA2-204ENST00000558259 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
APBA2-204ENST00000558259 ABCC9O60706 1549 aa18.57■□□□□ 0.56
APBA2-204ENST00000558259 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
APBA2-204ENST00000558259 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
APBA2-204ENST00000558259 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
APBA2-204ENST00000558259 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
APBA2-204ENST00000558259 NACADO15069 1562 aa18.33■□□□□ 0.53
APBA2-204ENST00000558259 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
APBA2-204ENST00000558259 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
APBA2-204ENST00000558259 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
APBA2-204ENST00000558259 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
APBA2-204ENST00000558259 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
APBA2-204ENST00000558259 MYT1Q01538 1121 aa18■□□□□ 0.47
APBA2-204ENST00000558259 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
APBA2-204ENST00000558259 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
APBA2-204ENST00000558259 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
APBA2-204ENST00000558259 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
APBA2-204ENST00000558259 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
APBA2-204ENST00000558259 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.45
APBA2-204ENST00000558259 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
APBA2-204ENST00000558259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
APBA2-204ENST00000558259 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
APBA2-204ENST00000558259 WIZO95785 1651 aa17.63■□□□□ 0.41
APBA2-204ENST00000558259 ACIN1Q9UKV3 1341 aaKnown RBP17.59■□□□□ 0.41
APBA2-204ENST00000558259 APLP2Q06481 763 aa17.58■□□□□ 0.4
APBA2-204ENST00000558259 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
APBA2-204ENST00000558259 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
APBA2-204ENST00000558259 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
APBA2-204ENST00000558259 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
APBA2-204ENST00000558259 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
APBA2-204ENST00000558259 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
APBA2-204ENST00000558259 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
APBA2-204ENST00000558259 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
APBA2-204ENST00000558259 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
APBA2-204ENST00000558259 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
APBA2-204ENST00000558259 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
APBA2-204ENST00000558259 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
APBA2-204ENST00000558259 ITGAEP38570 1179 aa17.3■□□□□ 0.36
APBA2-204ENST00000558259 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
APBA2-204ENST00000558259 CEP162Q5TB80 1403 aa17.27■□□□□ 0.35
APBA2-204ENST00000558259 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
APBA2-204ENST00000558259 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
APBA2-204ENST00000558259 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
APBA2-204ENST00000558259 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
APBA2-204ENST00000558259 SOGA1O94964 1423 aa17.21■□□□□ 0.35
APBA2-204ENST00000558259 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
APBA2-204ENST00000558259 TNIKQ9UKE5 1360 aa17.17■□□□□ 0.34
APBA2-204ENST00000558259 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.345e-6■■■■■ 29.2
APBA2-204ENST00000558259 MIER1Q8N108 512 aa17.13■□□□□ 0.33
APBA2-204ENST00000558259 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
APBA2-204ENST00000558259 EEA1Q15075 1411 aa17.03■□□□□ 0.32
APBA2-204ENST00000558259 GOLGA3Q08378 1498 aa17■□□□□ 0.31
APBA2-204ENST00000558259 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
APBA2-204ENST00000558259 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
APBA2-204ENST00000558259 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
APBA2-204ENST00000558259 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
APBA2-204ENST00000558259 CLIP1P30622 1438 aa16.92■□□□□ 0.3
APBA2-204ENST00000558259 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
APBA2-204ENST00000558259 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
APBA2-204ENST00000558259 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
APBA2-204ENST00000558259 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
APBA2-204ENST00000558259 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
APBA2-204ENST00000558259 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
APBA2-204ENST00000558259 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
APBA2-204ENST00000558259 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
APBA2-204ENST00000558259 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
APBA2-204ENST00000558259 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
APBA2-204ENST00000558259 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
APBA2-204ENST00000558259 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
APBA2-204ENST00000558259 CFTRP13569 1480 aa16.66■□□□□ 0.26
APBA2-204ENST00000558259 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
APBA2-204ENST00000558259 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
APBA2-204ENST00000558259 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
APBA2-204ENST00000558259 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
APBA2-204ENST00000558259 KIF21BO75037 1637 aa16.64■□□□□ 0.25
APBA2-204ENST00000558259 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
APBA2-204ENST00000558259 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
APBA2-204ENST00000558259 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
APBA2-204ENST00000558259 CUX1P39880 1505 aa16.56■□□□□ 0.24
APBA2-204ENST00000558259 BCANQ96GW7 911 aa16.56■□□□□ 0.24
APBA2-204ENST00000558259 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
APBA2-204ENST00000558259 NESP48681 1621 aa16.5■□□□□ 0.23
APBA2-204ENST00000558259 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
APBA2-204ENST00000558259 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
APBA2-204ENST00000558259 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
APBA2-204ENST00000558259 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms