Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
APOBEC1P41238 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 SPDYE18-201ENST00000510091 1050 ntBASIC14.1□□□□□ -0.15
APOBEC1P41238 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.1□□□□□ -0.15
APOBEC1P41238 TPRX2P-201ENST00000535362 881 ntBASIC14.1□□□□□ -0.15
APOBEC1P41238 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
APOBEC1P41238 RARRES2P5-201ENST00000564013 466 ntBASIC14.1□□□□□ -0.15
APOBEC1P41238 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 AC104794.3-201ENST00000566840 1248 ntBASIC14.1□□□□□ -0.15
APOBEC1P41238 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 AL645728.2-202ENST00000641679 227 ntBASIC14.1□□□□□ -0.15
APOBEC1P41238 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
APOBEC1P41238 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.1□□□□□ -0.15
APOBEC1P41238 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOBEC1P41238 KRT8P44-201ENST00000441609 1350 ntBASIC14.09□□□□□ -0.15
APOBEC1P41238 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOBEC1P41238 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOBEC1P41238 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
APOBEC1P41238 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.09□□□□□ -0.15
APOBEC1P41238 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 AL096865.1-201ENST00000606796 927 ntBASIC14.09□□□□□ -0.15
APOBEC1P41238 AL158212.4-201ENST00000624062 1286 ntBASIC14.09□□□□□ -0.15
APOBEC1P41238 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 AL109954.1-202ENST00000564051 2148 ntBASIC14.09□□□□□ -0.15
APOBEC1P41238 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOBEC1P41238 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOBEC1P41238 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOBEC1P41238 AC013268.4-201ENST00000637413 2228 ntBASIC14.09□□□□□ -0.15
APOBEC1P41238 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.08□□□□□ -0.15
APOBEC1P41238 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.08□□□□□ -0.15
APOBEC1P41238 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
APOBEC1P41238 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.08□□□□□ -0.15
APOBEC1P41238 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOBEC1P41238 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APOBEC1P41238 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOBEC1P41238 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.08□□□□□ -0.16
APOBEC1P41238 SPDYE19P-201ENST00000338590 713 ntBASIC14.08□□□□□ -0.16
APOBEC1P41238 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms