Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
SYN1P17600 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SYN1P17600 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 RN7SKP214-201ENST00000364208 315 ntBASIC16.74■□□□□ 0.27
SYN1P17600 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.74■□□□□ 0.27
SYN1P17600 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 PUDPP3-201ENST00000445368 636 ntBASIC16.74■□□□□ 0.27
SYN1P17600 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.74■□□□□ 0.27
SYN1P17600 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.74■□□□□ 0.27
SYN1P17600 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 AL136295.7-201ENST00000619226 1200 ntBASIC16.74■□□□□ 0.27
SYN1P17600 AC242376.2-201ENST00000619355 883 ntBASIC16.74■□□□□ 0.27
SYN1P17600 AC051619.9-201ENST00000623237 597 ntBASIC16.74■□□□□ 0.27
SYN1P17600 NAP1L6-202ENST00000641404 1222 ntBASIC16.74■□□□□ 0.27
SYN1P17600 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYN1P17600 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.74■□□□□ 0.27
SYN1P17600 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.74■□□□□ 0.27
SYN1P17600 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYN1P17600 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
SYN1P17600 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYN1P17600 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 AL136309.1-201ENST00000403917 691 ntBASIC16.73■□□□□ 0.27
SYN1P17600 AC012362.1-201ENST00000434906 739 ntBASIC16.73■□□□□ 0.27
SYN1P17600 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.73■□□□□ 0.27
SYN1P17600 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.73■□□□□ 0.27
SYN1P17600 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
SYN1P17600 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYN1P17600 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.73■□□□□ 0.27
SYN1P17600 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYN1P17600 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.73■□□□□ 0.27
SYN1P17600 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYN1P17600 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
SYN1P17600 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 AC020916.1-201ENST00000587762 1774 ntBASIC16.72■□□□□ 0.27
SYN1P17600 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 IGHV3-37-201ENST00000518544 340 ntBASIC16.72■□□□□ 0.27
SYN1P17600 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 MIR4649-201ENST00000582839 64 ntBASIC16.72■□□□□ 0.27
SYN1P17600 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.72■□□□□ 0.27
SYN1P17600 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 AC012313.1-201ENST00000593393 3059 ntBASIC16.72■□□□□ 0.27
SYN1P17600 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
SYN1P17600 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
SYN1P17600 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SYN1P17600 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SYN1P17600 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYN1P17600 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.71■□□□□ 0.27
SYN1P17600 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYN1P17600 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYN1P17600 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.71■□□□□ 0.27
SYN1P17600 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYN1P17600 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.71■□□□□ 0.27
SYN1P17600 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SYN1P17600 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYN1P17600 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYN1P17600 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SYN1P17600 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms