Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.27□□□□□ -0.28
HIST1H1DP16402 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H1DP16402 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H1DP16402 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AL355306.1-201ENST00000415580 579 ntBASIC13.27□□□□□ -0.29
HIST1H1DP16402 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AC034105.1-201ENST00000563488 319 ntBASIC13.27□□□□□ -0.29
HIST1H1DP16402 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AC104109.2-201ENST00000602919 1418 ntBASIC13.27□□□□□ -0.29
HIST1H1DP16402 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H1DP16402 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H1DP16402 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CICP11-201ENST00000434745 2827 ntBASIC13.26□□□□□ -0.29
HIST1H1DP16402 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 TFAMP1-201ENST00000412727 736 ntBASIC13.26□□□□□ -0.29
HIST1H1DP16402 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 AC007967.2-201ENST00000432613 625 ntBASIC13.26□□□□□ -0.29
HIST1H1DP16402 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 RN7SL589P-201ENST00000481268 310 ntBASIC13.26□□□□□ -0.29
HIST1H1DP16402 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 AL513190.1-201ENST00000621254 727 ntBASIC13.26□□□□□ -0.29
HIST1H1DP16402 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms