Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 AL442647.2-201ENST00000429864 857 ntBASIC17.12■□□□□ 0.33
ITGA4P13612 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA4P13612 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA4P13612 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.12■□□□□ 0.33
ITGA4P13612 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA4P13612 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.12■□□□□ 0.33
ITGA4P13612 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA4P13612 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ITGA4P13612 AC133539.2-201ENST00000604757 467 ntBASIC17.12■□□□□ 0.33
ITGA4P13612 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ITGA4P13612 AC018892.3-201ENST00000623986 2499 ntBASIC17.12■□□□□ 0.33
ITGA4P13612 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
ITGA4P13612 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.12■□□□□ 0.33
ITGA4P13612 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITGA4P13612 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ITGA4P13612 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.11■□□□□ 0.33
ITGA4P13612 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.11■□□□□ 0.33
ITGA4P13612 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.11■□□□□ 0.33
ITGA4P13612 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.11■□□□□ 0.33
ITGA4P13612 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.11■□□□□ 0.33
ITGA4P13612 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.11■□□□□ 0.33
ITGA4P13612 KRT17P8-201ENST00000540749 863 ntBASIC17.11■□□□□ 0.33
ITGA4P13612 AC106886.1-201ENST00000568660 600 ntBASIC17.11■□□□□ 0.33
ITGA4P13612 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 AC011477.6-201ENST00000604980 1927 ntBASIC17.11■□□□□ 0.33
ITGA4P13612 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ITGA4P13612 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
ITGA4P13612 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITGA4P13612 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.11■□□□□ 0.33
ITGA4P13612 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA4P13612 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ITGA4P13612 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ITGA4P13612 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA4P13612 AC112492.5-201ENST00000421897 457 ntBASIC17.1■□□□□ 0.33
ITGA4P13612 TMEM14DP-201ENST00000422205 345 ntBASIC17.1■□□□□ 0.33
ITGA4P13612 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA4P13612 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA4P13612 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA4P13612 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 RAB43P1-201ENST00000561790 589 ntBASIC17.1■□□□□ 0.33
ITGA4P13612 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA4P13612 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.1■□□□□ 0.33
ITGA4P13612 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGA4P13612 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGA4P13612 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGA4P13612 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGA4P13612 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGA4P13612 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ITGA4P13612 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGA4P13612 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
ITGA4P13612 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms