Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKL5O76039 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL5O76039 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDKL5O76039 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CDKL5O76039 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL5O76039 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL5O76039 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL5O76039 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL5O76039 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKL5O76039 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL5O76039 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 AC023024.2-201ENST00000623561 1993 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 AC022144.1-201ENST00000602255 1580 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 BASP1P1-201ENST00000430708 665 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 AL512638.1-201ENST00000457493 794 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 AC004890.2-204ENST00000481968 304 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 AC009407.1-201ENST00000568958 598 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL5O76039 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL5O76039 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL5O76039 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 LINC00554-201ENST00000564841 3011 ntBASIC18.13■□□□□ 0.49
CDKL5O76039 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDKL5O76039 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDKL5O76039 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL5O76039 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDKL5O76039 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 PMS2P2-201ENST00000425039 1128 ntBASIC18.12■□□□□ 0.49
CDKL5O76039 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 RFPL4AP1-201ENST00000530883 850 ntBASIC18.12■□□□□ 0.49
CDKL5O76039 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL5O76039 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL5O76039 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL5O76039 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms