Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
ZNF253O75346 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 WASH6P-202ENST00000359512 1437 ntBASIC12.24□□□□□ -0.45
ZNF253O75346 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ZNF253O75346 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ZNF253O75346 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 HCG4B-203ENST00000450128 991 ntBASIC12.24□□□□□ -0.45
ZNF253O75346 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF253O75346 AC092910.1-201ENST00000482027 1129 ntBASIC12.24□□□□□ -0.45
ZNF253O75346 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.24□□□□□ -0.45
ZNF253O75346 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 AC023141.13-201ENST00000604991 943 ntBASIC12.24□□□□□ -0.45
ZNF253O75346 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ZNF253O75346 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZNF253O75346 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.24□□□□□ -0.45
ZNF253O75346 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.24□□□□□ -0.45
ZNF253O75346 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 AC013726.1-201ENST00000563747 2285 ntBASIC12.23□□□□□ -0.45
ZNF253O75346 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 IGLL3P-201ENST00000412472 434 ntBASIC12.23□□□□□ -0.45
ZNF253O75346 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF253O75346 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF253O75346 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF253O75346 AL773604.1-201ENST00000617417 272 ntBASIC12.23□□□□□ -0.45
ZNF253O75346 AL161645.1-201ENST00000622716 1255 ntBASIC12.23□□□□□ -0.45
ZNF253O75346 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.23□□□□□ -0.45
ZNF253O75346 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF253O75346 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 CICP20-201ENST00000443330 2801 ntBASIC12.23□□□□□ -0.45
ZNF253O75346 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ZNF253O75346 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF253O75346 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF253O75346 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms