Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AL355864.2-201ENST00000447420 863 ntBASIC15.49■□□□□ 0.07
PCDHGA12O60330 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 AC084346.2-201ENST00000607097 949 ntBASIC15.49■□□□□ 0.07
PCDHGA12O60330 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA12O60330 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA12O60330 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AL592424.1-201ENST00000563624 1536 ntBASIC15.48■□□□□ 0.07
PCDHGA12O60330 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.48■□□□□ 0.07
PCDHGA12O60330 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA12O60330 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA12O60330 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC092933.1-201ENST00000393644 945 ntBASIC15.47■□□□□ 0.07
PCDHGA12O60330 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AC079316.1-201ENST00000548397 411 ntBASIC15.47■□□□□ 0.07
PCDHGA12O60330 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms