Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
UPK2O00526 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK2O00526 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 LINC00528-201ENST00000600723 2160 ntBASIC12.54□□□□□ -0.4
UPK2O00526 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
UPK2O00526 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK2O00526 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
UPK2O00526 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK2O00526 MIR3687-2-201ENST00000577708 61 ntBASIC12.54□□□□□ -0.4
UPK2O00526 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 MIR3687-1-201ENST00000614492 61 ntBASIC12.54□□□□□ -0.4
UPK2O00526 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UPK2O00526 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UPK2O00526 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UPK2O00526 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UPK2O00526 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK2O00526 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
UPK2O00526 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.53□□□□□ -0.4
UPK2O00526 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.53□□□□□ -0.4
UPK2O00526 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK2O00526 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.53□□□□□ -0.4
UPK2O00526 AL079307.3-201ENST00000556114 283 ntBASIC12.53□□□□□ -0.4
UPK2O00526 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK2O00526 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
UPK2O00526 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK2O00526 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 MIR4453-201ENST00000584019 89 ntBASIC12.53□□□□□ -0.4
UPK2O00526 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms