Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14□□□□□ -0.17
TVP23AA6NH52 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 CD81-202ENST00000381036 880 ntTSL 3 BASIC14□□□□□ -0.17
TVP23AA6NH52 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 KRT18P32-201ENST00000424695 1287 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 FAM58DP-201ENST00000428076 619 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14□□□□□ -0.17
TVP23AA6NH52 NME4-207ENST00000450036 985 ntTSL 3 BASIC14□□□□□ -0.17
TVP23AA6NH52 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14□□□□□ -0.17
TVP23AA6NH52 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14□□□□□ -0.17
TVP23AA6NH52 ALG1L8P-201ENST00000533887 760 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14□□□□□ -0.17
TVP23AA6NH52 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 AC055717.3-201ENST00000622967 595 ntBASIC14□□□□□ -0.17
TVP23AA6NH52 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14□□□□□ -0.17
TVP23AA6NH52 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14□□□□□ -0.17
TVP23AA6NH52 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TVP23AA6NH52 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TVP23AA6NH52 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AL645939.2-201ENST00000427340 991 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 AL353705.2-201ENST00000428243 662 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC005829.1-201ENST00000570002 483 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC105021.1-202ENST00000570572 669 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 AL671883.3-201ENST00000603274 991 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC003101.2-201ENST00000612557 442 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 AC126365.1-201ENST00000578585 1514 ntBASIC13.99□□□□□ -0.17
TVP23AA6NH52 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.99□□□□□ -0.17
TVP23AA6NH52 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TVP23AA6NH52 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TVP23AA6NH52 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.98□□□□□ -0.17
TVP23AA6NH52 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.98□□□□□ -0.17
TVP23AA6NH52 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
TVP23AA6NH52 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TVP23AA6NH52 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.98□□□□□ -0.17
TVP23AA6NH52 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms