Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 AC006449.5-201ENST00000610658 2098 ntBASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 AC025181.2-201ENST00000606994 802 ntBASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 AC009542.2-202ENST00000619004 1067 ntBASIC15.77■□□□□ 0.12
TBC1D3BA6NDS4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.77■□□□□ 0.11
TBC1D3BA6NDS4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 RN7SL560P-201ENST00000577943 264 ntBASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 AC132938.4-201ENST00000623835 848 ntBASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.76■□□□□ 0.11
TBC1D3BA6NDS4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.75■□□□□ 0.11
TBC1D3BA6NDS4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.75■□□□□ 0.11
TBC1D3BA6NDS4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TBC1D3BA6NDS4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms