Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 RN7SL204P-201ENST00000582831 262 ntBASIC14.82□□□□□ -0.04
LRIT2A6NDA9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 LINC02560-201ENST00000596379 459 ntBASIC14.82□□□□□ -0.04
LRIT2A6NDA9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 HMGN1P19-201ENST00000436976 333 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RN7SL399P-201ENST00000471648 279 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC036164.1-201ENST00000570544 333 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC008761.3-201ENST00000624803 892 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 SLC7A15P-201ENST00000424028 1363 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 AC023157.3-201ENST00000619086 2088 ntBASIC14.81□□□□□ -0.04
LRIT2A6NDA9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LRIT2A6NDA9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AC236430.1-201ENST00000402231 743 ntBASIC14.8□□□□□ -0.04
LRIT2A6NDA9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AC002472.2-201ENST00000442739 958 ntBASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 RRP7BP-205ENST00000566851 833 ntBASIC14.8□□□□□ -0.04
LRIT2A6NDA9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 AC099568.2-201ENST00000609194 695 ntBASIC14.8□□□□□ -0.04
LRIT2A6NDA9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRIT2A6NDA9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms